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DM42_4139 protein (Burkholderia cepacia) - STRING interaction network
"DM42_4139" - Conserved hypothetical protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_4139Conserved hypothetical protein (122 aa)    
Predicted Functional Partners:
DM42_1433
Conserved hypothetical protein (307 aa)
   
          0.769
WI67_16410
Uncharacterized protein (113 aa)
   
          0.755
DM42_1431
Conserved hypothetical protein (288 aa)
   
          0.752
DM42_2604
Conserved hypothetical protein (251 aa)
   
          0.742
DM42_5248
Conserved hypothetical protein (471 aa)
   
          0.741
WL94_22640
Uncharacterized protein (162 aa)
   
          0.741
DM42_261
Conserved hypothetical protein (204 aa)
   
          0.737
DM42_5789
Conserved hypothetical protein (124 aa)
   
          0.728
WL94_12310
Uncharacterized protein (115 aa)
   
          0.726
DM42_3631
Conserved hypothetical protein (100 aa)
   
          0.724
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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