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STRINGSTRING
DM42_4151 protein (Burkholderia cepacia) - STRING interaction network
"DM42_4151" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_4151annotation not available (277 aa)    
Predicted Functional Partners:
WI67_21660
Disulfide bond formation protein DsbA; efflux_EmrB- drug resistance MFS transporter, drug-H+ antiporter-2 family protein; Belongs to the major facilitator superfamily (528 aa)
 
          0.682
WL94_26600
Multidrug ABC transporter permease; RND_mfp- efflux transporter, RND family, MFP subunit (356 aa)
 
        0.648
WL94_26610
outer_NodT- efflux transporter, outer membrane factor (OMF) lipo, NodT family protein (495 aa)
 
          0.643
DM42_6086
annotation not available (682 aa)
   
        0.541
DM42_6655
annotation not available (228 aa)
   
          0.527
WI67_31450
Uncharacterized protein (107 aa)
   
          0.506
WI67_27340
annotation not available (97 aa)
   
          0.486
WI67_18720
annotation not available (294 aa)
   
 
      0.478
WL94_01305
annotation not available (276 aa)
   
          0.453
DM42_3422
annotation not available (355 aa)
   
          0.446
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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