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DM42_4156 protein (Burkholderia cepacia) - STRING interaction network
"DM42_4156" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_4156annotation not available (203 aa)    
Predicted Functional Partners:
DM42_4155
annotation not available (511 aa)
 
 
  0.781
DM42_5776
annotation not available (437 aa)
 
 
  0.726
DM42_4157
annotation not available (151 aa)
              0.604
WI67_10040
annotation not available (236 aa)
   
     
  0.539
DM42_1782
Conserved hypothetical protein (635 aa)
   
 
  0.519
DM42_3988
FGGY family of carbohydrate kinase, N-terminal domain protein (513 aa)
   
 
  0.476
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family (500 aa)
   
 
  0.476
DM42_7390
annotation not available (4558 aa)
 
 
  0.475
rpsC
30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation (266 aa)
       
 
  0.460
WI67_18260
annotation not available (108 aa)
   
      0.459
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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