STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_4191Organic hydroperoxide resistance protein; Organ_hyd_perox: peroxiredoxin, Ohr subfamily protein (139 aa)    
Predicted Functional Partners:
DM42_4190
Marr family transcriptional regulator, organic hydroperoxide resistance regulator; MarR family transcriptional regulator; Iron dependent repressor, N-terminal DNA binding domain protein
  
 0.863
DM42_3500
annotation not available
  
 0.728
ahpF
ahpF: alkyl hydroperoxide reductase subunit F
      
 0.602
hmpA
Nitric oxide dioxygenase; Belongs to the globin family
     
 0.543
holB
holB: DNA polymerase III, delta' subunit
      
 0.500
Hmp
3-ketosteroid 9alpha-monooxygenase subunit B; 3-ketosteroid-9-alpha-hydroxylase reductase subunit
      
 0.497
katE
Catalase family protein; Serves to protect cells from the toxic effects of hydrogen peroxide
  
  
 0.490
ahpD
Alkylhydroperoxidase ahpd family core domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
      
 0.489
DM42_1111
annotation not available
  
  
 0.475
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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