STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WI67_21500Organic hydroperoxide resistance protein; Organ_hyd_perox: peroxiredoxin, Ohr subfamily protein (139 aa)    
Predicted Functional Partners:
WL94_26755
MarR family transcriptional regulator; Iron dependent repressor, N-terminal DNA binding domain protein
  
 0.853
WL94_29420
annotation not available
  
 0.708
WL94_21815
annotation not available
     
 0.589
ahpF
ahpF: alkyl hydroperoxide reductase subunit F
      
 0.568
ahpC
Alkyl hydroperoxide reductase; ahpC: peroxiredoxin
     
 0.552
WL94_05720
3-ketosteroid-9-alpha-hydroxylase reductase subunit
      
 0.544
DM42_1111
annotation not available
  
  
 0.489
katE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide
  
  
 0.456
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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