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STRINGSTRING
DM42_4233 protein (Burkholderia cepacia) - STRING interaction network
"DM42_4233" - Conserved hypothetical protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_4233Conserved hypothetical protein (313 aa)    
Predicted Functional Partners:
WI67_21715
Uncharacterized protein (114 aa)
   
          0.783
WI67_28590
annotation not available (108 aa)
   
          0.779
WI67_27440
Uncharacterized protein (109 aa)
   
          0.773
WL94_13140
Purine-nucleoside phosphorylase (103 aa)
   
          0.771
DM42_6288
Conserved hypothetical protein (99 aa)
   
          0.770
WI67_29265
Purine-nucleoside phosphorylase (99 aa)
   
          0.770
WI67_03860
Uncharacterized protein (147 aa)
   
          0.763
WI67_30645
Uncharacterized protein (87 aa)
   
          0.761
DM42_3631
Conserved hypothetical protein (100 aa)
   
          0.759
WL94_30050
annotation not available (183 aa)
   
          0.753
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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