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WL94_17930 protein (Burkholderia cepacia) - STRING interaction network
"WL94_17930" - Uncharacterized protein in Burkholderia cepacia
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_17930Uncharacterized protein (152 aa)    
Predicted Functional Partners:
greA
Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3’terminus. GreA releases sequences of 2 to 3 nucleotides (158 aa)
              0.846
WI67_24090
Uncharacterized protein (91 aa)
   
          0.637
WI67_05365
annotation not available (91 aa)
   
          0.613
DM42_4887
Conserved hypothetical protein (91 aa)
   
          0.612
WI67_00390
annotation not available (168 aa)
   
          0.612
carB
CPSaseII_lrg- carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family (1084 aa)
              0.598
WI67_00425
annotation not available (136 aa)
   
          0.596
DM42_2158
Conserved hypothetical protein (399 aa)
   
          0.592
WI67_02600
Uncharacterized protein (158 aa)
   
          0.591
WI67_15215
DUF2244 domain-containing protein (161 aa)
   
          0.588
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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