STRINGSTRING
WL94_08180 protein (Burkholderia cepacia) - STRING interaction network
"WL94_08180" - HEQRo_perm_3TM: amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_08180HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein (237 aa)    
Predicted Functional Partners:
WL94_14570
HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein (229 aa)
 
0.992
VL15_28845
annotation not available (255 aa)
 
  0.990
WI67_20875
ABC transporter substrate-binding protein; 3A0103s03R- lysine-arginine-ornithine-binding periplasmic family protein; Belongs to the bacterial solute-binding protein 3 family (257 aa)
 
  0.978
DM42_6455
annotation not available (255 aa)
 
  0.963
WI67_05755
annotation not available (266 aa)
 
  0.963
WI67_13020
annotation not available (259 aa)
 
  0.962
WI67_05795
ABC transporter substrate-binding protein; 3A0103s03R- lysine-arginine-ornithine-binding periplasmic family protein; Belongs to the bacterial solute-binding protein 3 family (264 aa)
 
  0.961
WI67_31170
ABC transporter substrate-binding protein; 3A0103s03R- lysine-arginine-ornithine-binding periplasmic family protein (260 aa)
 
  0.958
DM42_6452
3A0103s03R- lysine-arginine-ornithine-binding periplasmic family protein (257 aa)
 
  0.958
WI67_21395
ABC transporter substrate-binding protein; 3A0103s03R- lysine-arginine-ornithine-binding periplasmic family protein; Belongs to the bacterial solute-binding protein 3 family (260 aa)
 
  0.958
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
Server load: low (9%) [HD]