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STRINGSTRING
benM protein (Burkholderia cepacia) - STRING interaction network
"benM" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
benMannotation not available (305 aa)    
Predicted Functional Partners:
benB
benzo_1_2_benB- benzoate 1,2-dioxygenase, small subunit (162 aa)
 
     
  0.867
benD
annotation not available (258 aa)
 
     
  0.767
catC
Muco_delta- muconolactone delta-isomerase (96 aa)
 
     
  0.764
WL94_37430
annotation not available (340 aa)
 
     
  0.734
cbdA
annotation not available (452 aa)
 
     
  0.732
WL94_27200
annotation not available (377 aa)
 
     
  0.722
WL94_37410
Muconate lactonizing enzyme; Belongs to the mandelate racemase/muconate lactonizing enzyme family (378 aa)
 
     
  0.709
WL94_27205
Catechol_proteo- catechol 1,2-dioxygenase (300 aa)
 
     
  0.707
WL94_37415
Catechol_proteo- catechol 1,2-dioxygenase (313 aa)
 
     
  0.701
argP
Chromosome replication initiation inhibitor protein; argP- transcriptional regulator, ArgP family protein (299 aa)
           
  0.579
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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