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gloB protein (Burkholderia cepacia) - STRING interaction network
"gloB" - GSH_gloB: hydroxyacylglutathione hydrolase in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gloBGSH_gloB- hydroxyacylglutathione hydrolase (278 aa)    
Predicted Functional Partners:
gloA
glyox_I- lactoylglutathione lyase (127 aa)
 
 
  0.973
hchA
annotation not available (293 aa)
       
  0.913
WL94_21305
annotation not available (332 aa)
   
 
  0.906
WI67_03435
annotation not available (469 aa)
         
  0.901
WL94_17890
annotation not available (270 aa)
 
   
  0.828
rnhA
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (147 aa)
         
  0.814
dnaQ
DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3’-5’ exonuclease (244 aa)
         
  0.767
WL94_17900
annotation not available (528 aa)
         
  0.697
DM42_6475
annotation not available (289 aa)
 
            0.666
gshB
Glut_syn- glutathione synthase (318 aa)
 
      0.645
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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