STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argGBelongs to the argininosuccinate synthase family. Type 2 subfamily (445 aa)    
Predicted Functional Partners:
argH
argH: argininosuccinate lyase
 
 
 0.996
argA
Amino-acid n-acetyltransferase; Belongs to the acetyltransferase family. ArgA subfamily
  
  
 0.995
carB
Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family
 
 0.995
argF
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
 
 
 0.981
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
  
 
 0.971
PurA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
  
 
 0.971
DM42_3422
annotation not available
  
 0.964
asnB
Asparagine synthase (glutamine-hydrolysing); Putative asparagine synthetase; asn_synth_AEB: asparagine synthase
  
 0.964
argE
acOrn-deacetyl: acetylornithine deacetylase; Belongs to the peptidase M20A family. ArgE subfamily
  
 0.963
ArgE
acOrn-deacetyl: acetylornithine deacetylase; Belongs to the peptidase M20A family. ArgE subfamily
  
 0.963
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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