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DM42_4425 protein (Burkholderia cepacia) - STRING interaction network
"DM42_4425" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_4425annotation not available (444 aa)    
Predicted Functional Partners:
DM42_4426
annotation not available (133 aa)
 
          0.750
DM42_4427
annotation not available (352 aa)
 
          0.660
DM42_1760
Conserved hypothetical protein (171 aa)
   
          0.518
DM42_4432
annotation not available (305 aa)
 
          0.498
DM42_4428
annotation not available (432 aa)
 
          0.492
rpoE
rpoE_Sigma70- RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily (199 aa)
           
  0.486
DM42_4431
annotation not available (517 aa)
 
     
  0.483
DM42_4430
acyl-CoA dehydrogenase, N-terminal domain protein (395 aa)
 
          0.437
DM42_6789
annotation not available (127 aa)
 
          0.405
WL94_06155
annotation not available (138 aa)
   
          0.405
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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