STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_4434annotation not available (336 aa)    
Predicted Functional Partners:
DM42_4435
Ketopantoate reductase pane/apba family protein; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family
 
    0.933
DM42_234
pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit
  
 
 0.915
DM42_2073
annotation not available
 0.914
PhbB-1
annotation not available
   
 0.914
phbB-1
Acetoacetyl-coa reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family
   
 0.914
phbB
acAcCoA_reduct: acetoacetyl-CoA reductase family protein
   
 0.914
scoA
pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit
  
 
 0.909
DM42_1299
Enoyl-coa hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family
 0.886
DM42_7297
Acetyl-coa c-acetyltransferase family protein; Belongs to the thiolase-like superfamily. Thiolase family
 
 0.868
DM42_2298
acCoA-C-Actrans: acetyl-CoA C-acetyltransferase family protein
 
 0.854
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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