STRINGSTRING
DM42_4460 protein (Burkholderia cepacia) - STRING interaction network
"DM42_4460" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_4460annotation not available (343 aa)    
Predicted Functional Partners:
WL94_10930
annotation not available (816 aa)
 
     
  0.703
WL94_10945
annotation not available (169 aa)
              0.645
WL94_20520
annotation not available (386 aa)
   
          0.594
WL94_26050
annotation not available (300 aa)
   
          0.539
WL94_26045
annotation not available (212 aa)
   
          0.509
WL94_04540
annotation not available (312 aa)
 
 
      0.491
WI67_25425
annotation not available (313 aa)
   
          0.479
WL94_10935
annotation not available (572 aa)
              0.447
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (325 aa)
       
 
  0.415
WL94_26885
annotation not available (305 aa)
   
          0.415
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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