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STRINGSTRING
DM42_4463 protein (Burkholderia cepacia) - STRING interaction network
"DM42_4463" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_4463annotation not available (184 aa)    
Predicted Functional Partners:
DM42_3756
annotation not available (771 aa)
 
 
  0.817
WL94_26945
Eps_fam- capsular exopolysaccharide family domain protein (741 aa)
 
 
  0.795
ptp
annotation not available (147 aa)
   
          0.573
DM42_4737
Conserved hypothetical protein (449 aa)
   
 
  0.507
WL94_04480
Iron-sulfur cluster carrier protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP (363 aa)
   
 
  0.498
WL94_10935
annotation not available (572 aa)
   
        0.498
WL94_10930
annotation not available (816 aa)
              0.497
WL94_12480
annotation not available (372 aa)
 
   
  0.471
DM42_3293
RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs (79 aa)
   
     
  0.470
WL94_14045
annotation not available (607 aa)
   
 
  0.468
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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