STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_4483annotation not available (175 aa)    
Predicted Functional Partners:
DM42_4484
annotation not available
   
 0.995
DM42_4482
annotation not available
 
   
 0.962
DM42_4481
Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family
 
 
   0.961
CysC
Bifunctional enzyme cysn/cysc; Catalyzes the synthesis of activated sulfate
   
    0.856
DM42_5902
annotation not available
   
    0.621
DM42_6272
Sulfite reductase (nadph) flavoprotein alpha-component; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily
   
    0.621
cysW
Sulfate/thiosulfate transport system permease protein; permease_CysW: sulfate ABC transporter, permease protein CysW
   
  
 0.542
cysA
Sulfate/thiosulfate transport system atp-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system
   
    0.533
DM42_1169
Autotrans_barl: outer membrane autotransporter barrel domain protein
  
     0.492
DM42_1824
Conserved hypothetical protein
  
     0.478
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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