STRINGSTRING
DM42_4485 protein (Burkholderia cepacia) - STRING interaction network
"DM42_4485" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_4485annotation not available (143 aa)    
Predicted Functional Partners:
WL94_10730
annotation not available (359 aa)
 
     
  0.650
WI67_32065
annotation not available (158 aa)
   
          0.573
WL94_11670
annotation not available (157 aa)
   
          0.566
DM42_1701
annotation not available (161 aa)
   
          0.564
WI67_23810
annotation not available (160 aa)
   
          0.561
WL94_10725
annotation not available (334 aa)
 
          0.558
VL15_03255
annotation not available (152 aa)
   
          0.540
WI67_30500
annotation not available (154 aa)
   
          0.534
DM42_2494
annotation not available (166 aa)
   
          0.529
DM42_6435
annotation not available (160 aa)
   
          0.525
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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