STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oxidoreductaseannotation not available (304 aa)    
Predicted Functional Partners:
ywnA_1
annotation not available
 
   
 0.898
polA
In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
     
 0.650
DM42_7351
annotation not available
  
 
 0.603
katE
Catalase family protein; Serves to protect cells from the toxic effects of hydrogen peroxide
 
 
 0.594
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
  
 
 0.551
ahpC_3
Thioredoxin-dependent peroxiredoxin; Peroxidase; C-terminal domain of 1-Cys peroxiredoxin family protein
  
 
 0.536
ahpC_2
annotation not available
  
 
 0.536
ahpC
Nadh-dependent peroxiredoxin subunit c; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
  
 
 0.536
arsB
Acr3: arsenical-resistance protein
  
  
 0.488
DM42_4612
annotation not available
 
 
 0.484
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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