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DM42_4623 protein (Burkholderia cepacia) - STRING interaction network
"DM42_4623" - Conserved hypothetical protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_4623Conserved hypothetical protein (104 aa)    
Predicted Functional Partners:
DM42_4614
annotation not available (199 aa)
 
          0.792
DM42_2077
annotation not available (198 aa)
 
          0.792
DM42_4615
Conserved hypothetical protein (182 aa)
 
          0.787
DM42_2078
Conserved hypothetical protein (181 aa)
 
          0.787
DM42_2082
annotation not available (93 aa)
 
          0.782
DM42_4586
trbJ_Ti- P-type conjugative transfer protein TrbJ (241 aa)
 
          0.780
DM42_4619
annotation not available (94 aa)
 
          0.780
DM42_4584
trbL_P- P-type conjugative transfer protein TrbL (456 aa)
 
          0.780
DM42_2048
trbJ_Ti- P-type conjugative transfer protein TrbJ (245 aa)
 
          0.779
DM42_4581
annotation not available (424 aa)
 
          0.778
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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