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DM42_4668 protein (Burkholderia cepacia) - STRING interaction network
"DM42_4668" - Ogt: methylated-DNA-[]-cysteine S-methyltransferase family protein in Burkholderia cepacia
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_4668Ogt- methylated-DNA-[]-cysteine S-methyltransferase family protein (177 aa)    
Predicted Functional Partners:
DM42_4667
alkA N-terminal domain protein (483 aa)
   
  0.976
WL94_39550
annotation not available (275 aa)
 
   
  0.921
WL94_03225
annotation not available (200 aa)
     
  0.849
DM42_3112
Conserved hypothetical protein (149 aa)
 
        0.752
WI67_12710
hypoxanDNAglyco- DNA-deoxyinosine glycosylase (159 aa)
            0.706
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (917 aa)
     
 
  0.585
WL94_32050
3-methyladenine DNA glycosylase 2; alkA N-terminal domain protein (319 aa)
 
   
  0.559
DM42_5617
sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein (628 aa)
     
 
  0.454
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (683 aa)
     
 
  0.454
DM42_3834
sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein (508 aa)
     
 
  0.454
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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