STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_01430annotation not available (223 aa)    
Predicted Functional Partners:
WL94_01425
Sensor protein; Member of a two-component regulatory system
 0.989
WL94_14300
Sensor protein; Member of a two-component regulatory system
 0.928
DM42_7273
cztS_silS_copS: heavy metal sensor kinase family protein
 0.927
DM42_3670
cztS_silS_copS: heavy metal sensor kinase family protein
 0.915
WL94_15390
annotation not available
 
 
 0.724
WI67_28635
annotation not available
 
 0.696
DM42_65
annotation not available
 
 
 0.689
phoR
PAS domain-containing sensor histidine kinase; phoR_proteo: phosphate regulon sensor kinase PhoR
 
 0.668
WL94_03885
annotation not available
 
 0.666
DM42_4823
annotation not available
 
 0.644
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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