Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_1419 | DM42_2016 | DM42_1419 | DM42_2016 | annotation not available | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | 0.989 |
DM42_1419 | DM42_5906 | DM42_1419 | DM42_5906 | annotation not available | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | 0.989 |
DM42_1419 | SpeB | DM42_1419 | DM42_4734 | annotation not available | Guanidinobutyrase; Belongs to the arginase family | 0.817 |
DM42_1419 | gdhA | DM42_1419 | DM42_1174 | annotation not available | Glu/leu/phe/val dehydrogenase, dimerization domain protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family | 0.995 |
DM42_1419 | glnA | DM42_1419 | DM42_2938 | annotation not available | glnA: glutamine synthetase, type I | 0.989 |
DM42_1419 | glsA | DM42_1419 | DM42_5818 | annotation not available | Belongs to the glutaminase family | 0.945 |
DM42_1419 | putA | DM42_1419 | DM42_1669 | annotation not available | Rhh-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source | 0.924 |
DM42_1419 | puuA_3 | DM42_1419 | DM42_2923 | annotation not available | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | 0.989 |
DM42_2016 | DM42_1419 | DM42_2016 | DM42_1419 | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | annotation not available | 0.989 |
DM42_2016 | DM42_5906 | DM42_2016 | DM42_5906 | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | 0.677 |
DM42_2016 | SpeB | DM42_2016 | DM42_4734 | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | Guanidinobutyrase; Belongs to the arginase family | 0.826 |
DM42_2016 | gdhA | DM42_2016 | DM42_1174 | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | Glu/leu/phe/val dehydrogenase, dimerization domain protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family | 0.926 |
DM42_2016 | glnA | DM42_2016 | DM42_2938 | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | glnA: glutamine synthetase, type I | 0.674 |
DM42_2016 | glsA | DM42_2016 | DM42_5818 | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | Belongs to the glutaminase family | 0.920 |
DM42_2016 | putA | DM42_2016 | DM42_1669 | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | Rhh-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source | 0.961 |
DM42_2016 | puuA_3 | DM42_2016 | DM42_2923 | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | 0.603 |
DM42_5906 | DM42_1419 | DM42_5906 | DM42_1419 | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | annotation not available | 0.989 |
DM42_5906 | DM42_2016 | DM42_5906 | DM42_2016 | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | 0.677 |
DM42_5906 | SpeB | DM42_5906 | DM42_4734 | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | Guanidinobutyrase; Belongs to the arginase family | 0.851 |
DM42_5906 | gdhA | DM42_5906 | DM42_1174 | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | Glu/leu/phe/val dehydrogenase, dimerization domain protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family | 0.926 |
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