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STRINGSTRING
DM42_4737 protein (Burkholderia cepacia) - STRING interaction network
"DM42_4737" - Conserved hypothetical protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_4737Conserved hypothetical protein (449 aa)    
Predicted Functional Partners:
DM42_4324
annotation not available (772 aa)
 
          0.742
DM42_6831
annotation not available (135 aa)
   
          0.736
DM42_4810
Primase C terminal 2 family protein (615 aa)
   
          0.683
DM42_4939
acyl-CoA dehydrogenase, C-terminal domain protein (371 aa)
   
          0.626
DM42_6752
annotation not available (388 aa)
   
          0.617
WL94_09625
annotation not available (271 aa)
   
          0.610
WL94_17690
Porin; OMP85_target- outer membrane insertion C-terminal signal domain protein (356 aa)
   
          0.609
DM42_2695
annotation not available (98 aa)
   
          0.589
DM42_5573
annotation not available (262 aa)
   
 
      0.584
virB5
virB5- P-type DNA transfer protein VirB5 (236 aa)
   
          0.577
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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