STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cynSCyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide (156 aa)    
Predicted Functional Partners:
cynT_2
Carbonic anhydrase 1; Reversible hydration of carbon dioxide
 
 
 0.990
cynT_1
Carbonic anhydrase 1; Reversible hydration of carbon dioxide
 
 
 0.960
DM42_2144
annotation not available
  
 
 0.926
DM42_2804
Carbonic anhydrase family protein; Reversible hydration of carbon dioxide
  
 
 0.926
CynR
Lysr family transcriptional regulator, cyn operon transcriptional activator; Belongs to the LysR transcriptional regulatory family
 
   
 0.844
GuaD
annotation not available
     0.764
cynR
Lysr family transcriptional regulator, cyn operon transcriptional activator; Belongs to the LysR transcriptional regulatory family
  
   
 0.654
DM42_6272
Sulfite reductase (nadph) flavoprotein alpha-component; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily
 
   
 0.521
DM42_5132
Uncharacterized protein
 
     0.512
DM42_390
annotation not available
 
   
 0.487
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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