STRINGSTRING
bkdA1 protein (Burkholderia cepacia) - STRING interaction network
"bkdA1" - annotation not available in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bkdA1annotation not available (410 aa)    
Predicted Functional Partners:
bkdA2
annotation not available (334 aa)
  0.999
bkdB
annotation not available (437 aa)
 
  0.998
WL94_17645
lipoamide_DH- dihydrolipoyl dehydrogenase (463 aa)
 
 
  0.994
acoB
Pyruvate dehydrogenase; Acetoin-2,6-dichlorophenolindophenol oxidoreductase subunit beta (334 aa)
 
  0.993
WL94_27870
lipoamide_DH- dihydrolipoyl dehydrogenase (476 aa)
 
 
  0.934
ilvE
Branched-chain-amino-acid aminotransferase; Acts on leucine, isoleucine and valine; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family (307 aa)
   
 
  0.924
DM42_2953
lipoamide_DH- dihydrolipoyl dehydrogenase (589 aa)
   
 
  0.924
WL94_39140
annotation not available (326 aa)
   
 
  0.915
acdS
1-aminocyclopropane-1-carboxylate deaminase; Catalyzes a cyclopropane ring-opening reaction, the irreversible conversion of 1-aminocyclopropane-1-carboxylate (ACC) to ammonia and alpha-ketobutyrate. Allows growth on ACC as a nitrogen source; Belongs to the ACC deaminase/D-cysteine desulfhydrase family (338 aa)
         
    0.800
sucB
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) (425 aa)
 
 
  0.774
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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