DM42_4898 protein (Burkholderia cepacia) - STRING interaction network

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Predicted Interactions

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Score

DM42_4898

annotation not available (319 aa)

Predicted Functional Partners:

DM42_2977

0.729

polA

0.642

DM42_4900

0.630

DM42_4897

0.469

WL94_10715

0.458

DM42_5617

0.447

rpoD

0.447

DM42_3834

0.447

rpoS

0.447

rpoH

0.447

Your Current Organism:

Burkholderia cepacia

NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717

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... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DM42_2977	DM42_4898	DM42_2977	DM42_4898	comEC_Rec2- DNA internalization-related competence protein ComEC/Rec2	annotation not available	0.729
DM42_2977	polA	DM42_2977	DM42_4183	comEC_Rec2- DNA internalization-related competence protein ComEC/Rec2	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity	0.802
DM42_3834	DM42_4898	DM42_3834	DM42_4898	sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein	annotation not available	0.447
DM42_3834	WL94_10715	DM42_3834	DM42_4489	sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein	annotation not available	0.404
DM42_3834	polA	DM42_3834	DM42_4183	sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity	0.694
DM42_4897	DM42_4898	DM42_4897	DM42_4898	annotation not available	annotation not available	0.469
DM42_4898	DM42_2977	DM42_4898	DM42_2977	annotation not available	comEC_Rec2- DNA internalization-related competence protein ComEC/Rec2	0.729
DM42_4898	DM42_3834	DM42_4898	DM42_3834	annotation not available	sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein	0.447
DM42_4898	DM42_4897	DM42_4898	DM42_4897	annotation not available	annotation not available	0.469
DM42_4898	DM42_4900	DM42_4898	DM42_4900	annotation not available	ribP_PPkin- ribose-phosphate diphosphokinase family protein	0.630
DM42_4898	DM42_5617	DM42_4898	DM42_5617	annotation not available	sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein	0.447
DM42_4898	WL94_10715	DM42_4898	DM42_4489	annotation not available	annotation not available	0.458
DM42_4898	polA	DM42_4898	DM42_4183	annotation not available	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity	0.642
DM42_4898	rpoD	DM42_4898	DM42_4169	annotation not available	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth	0.447
DM42_4898	rpoH	DM42_4898	DM42_2254	annotation not available	rpoH_proteo- alternative sigma factor RpoH	0.447
DM42_4898	rpoS	DM42_4898	DM42_3280	annotation not available	rpoS_proteo- RNA polymerase sigma factor RpoS	0.447
DM42_4900	DM42_4898	DM42_4900	DM42_4898	ribP_PPkin- ribose-phosphate diphosphokinase family protein	annotation not available	0.630
DM42_5617	DM42_4898	DM42_5617	DM42_4898	sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein	annotation not available	0.447
DM42_5617	WL94_10715	DM42_5617	DM42_4489	sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein	annotation not available	0.404
DM42_5617	polA	DM42_5617	DM42_4183	sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity	0.700

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