STRINGSTRING
DM42_4961 protein (Burkholderia cepacia) - STRING interaction network
"DM42_4961" - Thioester-redct: thioester reductase domain protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_4961Thioester-redct- thioester reductase domain protein (1188 aa)    
Predicted Functional Partners:
DM42_4965
annotation not available (453 aa)
     
  0.931
DM42_4962
annotation not available (308 aa)
 
          0.931
DM42_4964
Conserved hypothetical protein (260 aa)
 
     
  0.908
DM42_4963
annotation not available (129 aa)
 
          0.870
DM42_4960
annotation not available (162 aa)
          0.861
VL15_05360
annotation not available (80 aa)
 
 
  0.817
rifR
annotation not available (257 aa)
   
  0.714
WL94_38285
annotation not available (549 aa)
   
0.704
WL94_33025
annotation not available (587 aa)
   
0.590
DM42_5759
Isochor_syn- isochorismate synthase family protein (477 aa)
 
   
  0.547
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
Server load: low (8%) [HD]