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DM42_4962 protein (Burkholderia cepacia) - STRING interaction network
"DM42_4962" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_4962annotation not available (308 aa)    
Predicted Functional Partners:
DM42_4964
Conserved hypothetical protein (260 aa)
 
     
  0.959
DM42_4961
Thioester-redct- thioester reductase domain protein (1188 aa)
 
          0.931
DM42_4960
annotation not available (162 aa)
 
     
  0.928
DM42_4963
annotation not available (129 aa)
 
          0.893
DM42_6038
Conserved hypothetical protein (386 aa)
   
          0.646
WL94_19475
annotation not available (167 aa)
   
          0.641
DM42_5331
Conserved hypothetical protein (289 aa)
   
          0.614
DM42_3891
Conserved hypothetical protein (152 aa)
   
          0.607
DM42_4746
annotation not available (196 aa)
   
          0.600
WL94_10950
annotation not available (317 aa)
   
          0.567
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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