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DM42_4974 protein (Burkholderia cepacia) - STRING interaction network
"DM42_4974" - annotation not available in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_4974annotation not available (457 aa)    
Predicted Functional Partners:
WL94_26545
annotation not available (244 aa)
 
   
  0.784
DM42_6170
annotation not available (289 aa)
   
     
  0.747
WL94_25830
PBP_1a_fam- penicillin-binding , 1A family protein (709 aa)
   
     
  0.628
WL94_10285
annotation not available (289 aa)
 
 
 
  0.559
WL94_15740
PBP_1a_fam- penicillin-binding , 1A family protein (795 aa)
 
     
  0.498
WL94_31175
PBP_1a_fam- penicillin-binding , 1A family protein (840 aa)
 
     
  0.486
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate (1354 aa)
   
        0.483
DM42_1123
annotation not available (469 aa)
 
 
 
  0.466
WI67_15265
Peptidase S41; Prc- C-terminal processing peptidase family protein; Belongs to the peptidase S41A family (515 aa)
 
 
 
  0.456
secF
Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (316 aa)
 
        0.442
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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