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DM42_498 protein (Burkholderia cepacia) - STRING interaction network
"DM42_498" - penta_MxKDx: pentapeptide MXKDX repeat family protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_498penta_MxKDx- pentapeptide MXKDX repeat family protein (85 aa)    
Predicted Functional Partners:
WL94_17505
annotation not available (210 aa)
 
     
  0.880
WI67_05965
annotation not available (262 aa)
 
     
  0.784
DM42_5223
Conserved hypothetical protein (421 aa)
   
          0.587
WL94_01060
annotation not available (71 aa)
   
          0.556
WI67_23550
annotation not available (590 aa)
   
          0.533
DM42_5917
Conserved hypothetical protein (505 aa)
   
          0.499
DM42_5360
Conserved hypothetical protein (197 aa)
   
          0.499
DM42_6995
annotation not available (94 aa)
   
          0.473
WL94_39025
annotation not available (540 aa)
   
          0.452
DM42_988
annotation not available (185 aa)
   
          0.420
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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