STRINGSTRING
DM42_5006 protein (Burkholderia cepacia) - STRING interaction network
"DM42_5006" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_5006annotation not available (265 aa)    
Predicted Functional Partners:
WL94_07065
annotation not available (341 aa)
 
          0.881
DM42_6223
annotation not available (108 aa)
    
          0.509
WL94_21230
annotation not available (121 aa)
    
          0.508
WI67_18280
annotation not available (291 aa)
    
     
  0.443
WL94_26390
Uncharacterized protein (416 aa)
    
          0.416
DM42_6148
annotation not available (284 aa)
    
     
  0.415
WI67_28590
annotation not available (108 aa)
    
          0.412
WI67_32325
annotation not available (749 aa)
 
     
  0.405
WI67_21325
annotation not available (381 aa)
    
          0.401
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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