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STRINGSTRING
WL94_07050 protein (Burkholderia cepacia) - STRING interaction network
"WL94_07050" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_07050annotation not available (307 aa)    
Predicted Functional Partners:
DM42_5009
annotation not available (295 aa)
 
          0.831
DM42_1040
annotation not available (315 aa)
   
 
      0.655
WL94_26400
annotation not available (325 aa)
   
          0.537
DM42_5011
Conserved hypothetical protein (64 aa)
              0.534
DM42_6998
annotation not available (306 aa)
   
          0.476
DM42_4251
annotation not available (358 aa)
   
 
      0.471
WI67_29070
annotation not available (304 aa)
   
          0.455
DM42_7329
annotation not available (156 aa)
   
 
      0.427
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (325 aa)
       
 
  0.415
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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