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kduD protein (Burkholderia cepacia) - STRING interaction network
kduD: 2-deoxy-D-gluconate 3-dehydrogenase in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
kduDkduD- 2-deoxy-D-gluconate 3-dehydrogenase (268 aa)    
Predicted Functional Partners:
kduI
annotation not available (278 aa)
 
  0.996
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate (353 aa)
 
   
  0.944
WL94_30080
annotation not available (308 aa)
 
  0.839
WL94_29825
annotation not available (330 aa)
 
  0.836
kdgR
annotation not available (298 aa)
 
        0.834
gnd
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH; Belongs to the 6-phosphogluconate dehydrogenase family (470 aa)
   
 
  0.813
rpe
Rpe- ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family (228 aa)
         
  0.806
rpiA
Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate (231 aa)
     
 
  0.804
kdgT
kdgT- 2-keto-3-deoxygluconate transporter (339 aa)
 
   
  0.600
DM42_6948
Beta-ketoacyl synthase, C-terminal domain protein (424 aa)
 
 
  0.530
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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