Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_3834 | WI67_17370 | DM42_3834 | DM42_5098 | sigma70-ECF: RNA polymerase sigma factor, sigma-70 family protein | annotation not available | 0.456 |
DM42_3834 | rpoA | DM42_3834 | DM42_1447 | sigma70-ECF: RNA polymerase sigma factor, sigma-70 family protein | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates | 0.835 |
DM42_3834 | rpoB | DM42_3834 | DM42_1481 | sigma70-ECF: RNA polymerase sigma factor, sigma-70 family protein | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates | 0.872 |
DM42_3834 | rpoC | DM42_3834 | DM42_1480 | sigma70-ECF: RNA polymerase sigma factor, sigma-70 family protein | DNA-directed RNA polymerase subunit beta'; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates | 0.848 |
DM42_5617 | WI67_17370 | DM42_5617 | DM42_5098 | sigma70-ECF: RNA polymerase sigma factor, sigma-70 family protein | annotation not available | 0.456 |
DM42_5617 | rpoA | DM42_5617 | DM42_1447 | sigma70-ECF: RNA polymerase sigma factor, sigma-70 family protein | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates | 0.864 |
DM42_5617 | rpoB | DM42_5617 | DM42_1481 | sigma70-ECF: RNA polymerase sigma factor, sigma-70 family protein | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates | 0.895 |
DM42_5617 | rpoC | DM42_5617 | DM42_1480 | sigma70-ECF: RNA polymerase sigma factor, sigma-70 family protein | DNA-directed RNA polymerase subunit beta'; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates | 0.873 |
WI67_17370 | DM42_3834 | DM42_5098 | DM42_3834 | annotation not available | sigma70-ECF: RNA polymerase sigma factor, sigma-70 family protein | 0.456 |
WI67_17370 | DM42_5617 | DM42_5098 | DM42_5617 | annotation not available | sigma70-ECF: RNA polymerase sigma factor, sigma-70 family protein | 0.456 |
WI67_17370 | WI67_17375 | DM42_5098 | DM42_5097 | annotation not available | annotation not available | 0.634 |
WI67_17370 | WL94_15815 | DM42_5098 | DM42_1419 | annotation not available | annotation not available | 0.642 |
WI67_17370 | hemN | DM42_5098 | DM42_916 | annotation not available | hemN: oxygen-independent coproporphyrinogen III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family | 0.529 |
WI67_17370 | rpoA | DM42_5098 | DM42_1447 | annotation not available | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates | 0.468 |
WI67_17370 | rpoB | DM42_5098 | DM42_1481 | annotation not available | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates | 0.457 |
WI67_17370 | rpoC | DM42_5098 | DM42_1480 | annotation not available | DNA-directed RNA polymerase subunit beta'; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates | 0.478 |
WI67_17370 | rpoD | DM42_5098 | DM42_4169 | annotation not available | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth | 0.456 |
WI67_17370 | rpoS | DM42_5098 | DM42_3280 | annotation not available | rpoS_proteo: RNA polymerase sigma factor RpoS | 0.467 |
WI67_17375 | WI67_17370 | DM42_5097 | DM42_5098 | annotation not available | annotation not available | 0.634 |
WL94_15815 | WI67_17370 | DM42_1419 | DM42_5098 | annotation not available | annotation not available | 0.642 |
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