STRINGSTRING
WL94_06385 protein (Burkholderia cepacia) - STRING interaction network
"WL94_06385" - annotation not available in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_06385annotation not available (273 aa)    
Predicted Functional Partners:
DM42_5120
annotation not available (235 aa)
   
  0.928
WI67_11050
annotation not available (159 aa)
 
            0.665
WL94_38285
annotation not available (549 aa)
 
   
  0.652
DM42_5759
Isochor_syn- isochorismate synthase family protein (477 aa)
   
   
  0.572
lepA
Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner (597 aa)
         
  0.556
lepB
sigpep_I_bact- signal peptidase I; Belongs to the peptidase S26 family (297 aa)
           
  0.541
WL94_38270
Non-ribosomal peptide synthetase; AA-adenyl-dom- amino acid adenylation domain protein (1828 aa)
   
   
  0.531
WI67_16990
Uncharacterized protein (77 aa)
              0.508
VL15_05360
annotation not available (80 aa)
 
   
  0.426
fptA
annotation not available (726 aa)
 
   
  0.401
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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