STRINGSTRING
araD protein (Burkholderia cepacia) - STRING interaction network
"araD" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
araDannotation not available (309 aa)    
Predicted Functional Partners:
WI67_32145
annotation not available (583 aa)
 
 
  0.970
WL94_02635
annotation not available (525 aa)
 
 
  0.934
DM42_6642
annotation not available (527 aa)
 
 
  0.933
WL94_08215
annotation not available (530 aa)
 
 
  0.933
kdgD
kdgD- 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family (304 aa)
   
   
    0.927
WI67_32135
annotation not available (309 aa)
 
        0.854
WL94_00865
annotation not available (316 aa)
 
          0.583
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose (348 aa)
           
  0.560
WI67_32130
annotation not available (337 aa)
              0.530
WL94_00840
Arabinose import ATP-binding protein AraG; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family (515 aa)
         
  0.508
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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