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STRINGSTRING
WL94_29000 protein (Burkholderia cepacia) - STRING interaction network
"WL94_29000" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_29000annotation not available (345 aa)    
Predicted Functional Partners:
pvdA
L-ornithine N(5)-monooxygenase; Catalyzes the conversion of L-ornithine to N(5)- hydroxyornithine, the first step in the biosynthesis of all hydroxamate-containing siderophores, such as ornibactin (458 aa)
   
  0.952
dltA
Non-ribosomal peptide synthetase; D-ala-DACP-lig- D-alanine--poly(phosphoribitol) ligase, subunit 1 (3220 aa)
 
   
  0.921
WL94_28995
Non-ribosomal peptide synthetase; AA-adenyl-dom- amino acid adenylation domain protein (1673 aa)
 
   
  0.904
WL94_29010
tonB-siderophor- TonB-dependent siderophore receptor family protein (747 aa)
 
        0.702
WL94_28985
Cyc_pep_trnsptr- cyclic peptide transporter family protein (581 aa)
 
     
  0.682
DM42_6412
annotation not available (451 aa)
   
  0.651
WL94_29020
annotation not available (338 aa)
 
     
0.576
WL94_29015
annotation not available (279 aa)
              0.516
DM42_1824
Conserved hypothetical protein (301 aa)
   
          0.474
DM42_1642
Conserved hypothetical protein (182 aa)
   
          0.464
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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