STRINGSTRING
DM42_5212 protein (Burkholderia cepacia) - STRING interaction network
"DM42_5212" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_5212annotation not available (148 aa)    
Predicted Functional Partners:
WL94_09710
annotation not available (155 aa)
 
        0.743
WL94_00690
annotation not available (287 aa)
 
          0.734
DM42_5776
annotation not available (437 aa)
   
 
  0.601
DM42_3988
FGGY family of carbohydrate kinase, N-terminal domain protein (513 aa)
   
 
  0.476
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family (500 aa)
   
 
  0.476
dacB
PBP4- D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (510 aa)
     
 
  0.465
rpsC
30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation (266 aa)
       
 
  0.460
DM42_6504
annotation not available (528 aa)
     
 
  0.459
DM42_5118
annotation not available (1343 aa)
     
 
  0.444
DM42_1782
Conserved hypothetical protein (635 aa)
     
 
  0.444
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
Server load: low (14%) [HD]