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DM42_5229 protein (Burkholderia cepacia) - STRING interaction network
"DM42_5229" - Organ_hyd_perox: peroxiredoxin, Ohr subfamily protein in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_5229Organ_hyd_perox- peroxiredoxin, Ohr subfamily protein (171 aa)    
Predicted Functional Partners:
DM42_5230
annotation not available (251 aa)
   
        0.803
DM42_5228
annotation not available (250 aa)
              0.713
WL94_29420
annotation not available (151 aa)
   
  0.564
WL94_26755
MarR family transcriptional regulator; Iron dependent repressor, N-terminal DNA binding domain protein (150 aa)
   
  0.521
DM42_5231
annotation not available (334 aa)
 
          0.496
DM42_1111
annotation not available (162 aa)
   
   
  0.473
katE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide (704 aa)
   
   
  0.456
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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