STRINGSTRING
hpnH protein (Burkholderia cepacia) - STRING interaction network
"hpnH" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hpnHannotation not available (386 aa)    
Predicted Functional Partners:
WI67_31805
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis; Belongs to the IspH family (313 aa)
 
     
  0.879
WL94_00525
annotation not available (395 aa)
 
     
  0.834
WL94_33510
Hopene_cyclase- squalene-hopene cyclase (679 aa)
 
     
  0.826
WI67_32285
Hopene_cyclase- squalene-hopene cyclase (657 aa)
 
     
  0.826
DM43_2134
annotation not available (335 aa)
 
     
  0.788
WL94_01000
annotation not available (235 aa)
 
     
  0.786
WI67_05725
annotation not available (473 aa)
 
     
  0.780
WL94_00990
annotation not available (877 aa)
 
          0.776
WL94_17265
annotation not available (391 aa)
 
     
  0.728
WI67_32295
hpnD- squalene synthase HpnD (282 aa)
 
     
  0.670
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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