• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
DM42_526 protein (Burkholderia cepacia) - STRING interaction network
"DM42_526" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_526annotation not available (320 aa)    
Predicted Functional Partners:
DM42_525
annotation not available (231 aa)
              0.849
DM42_527
annotation not available (363 aa)
 
          0.785
DM42_4919
annotation not available (75 aa)
   
          0.743
DM42_528
annotation not available (734 aa)
 
          0.586
DM42_529
annotation not available (146 aa)
              0.530
DM42_5280
Conserved hypothetical protein (209 aa)
   
          0.430
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (325 aa)
       
 
  0.415
WL94_13145
annotation not available (321 aa)
   
 
      0.409
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
Server load: low (18%) [HD]