STRINGSTRING
DM42_5267 protein (Burkholderia cepacia) - STRING interaction network
"DM42_5267" - Conserved hypothetical protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_5267Conserved hypothetical protein (83 aa)    
Predicted Functional Partners:
DM42_5587
Conserved hypothetical protein (91 aa)
   
          0.783
DM42_3497
Conserved hypothetical protein (108 aa)
   
          0.783
WL94_19970
Uncharacterized protein (99 aa)
   
          0.782
DM42_3496
Conserved hypothetical protein (108 aa)
   
          0.781
DM42_1806
Conserved hypothetical protein (105 aa)
   
          0.781
WI67_03860
Uncharacterized protein (147 aa)
   
          0.780
WL94_31165
annotation not available (392 aa)
   
          0.779
WI67_07945
Uncharacterized protein (111 aa)
   
          0.778
WL94_17225
Uncharacterized protein (267 aa)
   
          0.777
WL94_01100
Serine/threonine protein kinase (125 aa)
   
          0.776
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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