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DM42_5280 protein (Burkholderia cepacia) - STRING interaction network
"DM42_5280" - Conserved hypothetical protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_5280Conserved hypothetical protein (209 aa)    
Predicted Functional Partners:
WL94_34755
annotation not available (215 aa)
   
     
  0.606
DM42_5279
Conserved hypothetical protein (41 aa)
              0.585
WL94_00360
annotation not available (127 aa)
              0.527
WL94_11050
annotation not available (372 aa)
   
          0.525
DM42_2389
annotation not available (360 aa)
   
          0.504
WI67_02345
annotation not available (115 aa)
   
          0.496
DM42_5662
annotation not available (469 aa)
   
          0.485
WL94_14515
annotation not available (206 aa)
   
     
  0.456
DM42_5811
annotation not available (188 aa)
   
          0.443
DM42_526
annotation not available (320 aa)
   
          0.430
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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