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DM42_5324 protein (Burkholderia cepacia) - STRING interaction network
"DM42_5324" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_5324annotation not available (192 aa)    
Predicted Functional Partners:
DM42_164
annotation not available (94 aa)
   
          0.712
pgaA
PGA_TPR_OMP- poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA (877 aa)
   
          0.710
DM42_1755
annotation not available (100 aa)
   
          0.704
DM42_5662
annotation not available (469 aa)
   
          0.702
WL94_22880
annotation not available (74 aa)
   
          0.697
WL94_12725
annotation not available (487 aa)
   
          0.680
DM42_5417
annotation not available (197 aa)
   
          0.639
DM42_2885
Conserved hypothetical protein (753 aa)
   
          0.638
WL94_10910
Uncharacterized protein (150 aa)
   
          0.630
WL94_12835
annotation not available (229 aa)
   
          0.602
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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