STRINGSTRING
WI67_05810 protein (Burkholderia cepacia) - STRING interaction network
"WI67_05810" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WI67_05810annotation not available (182 aa)    
Predicted Functional Partners:
rpmI
rpmI_bact- ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family (65 aa)
   
        0.727
DM42_5332
annotation not available (499 aa)
   
        0.717
DM42_3157
annotation not available (182 aa)
 
 
  0.688
rpmE
L31- ribosomal protein L31 (86 aa)
     
        0.630
ahpC
Alkyl hydroperoxide reductase; ahpC- peroxiredoxin (187 aa)
 
 
0.627
WI67_03875
Peroxidase; C-terminal domain of 1-Cys peroxiredoxin family protein (212 aa)
   
 
0.586
WI67_05805
GGDEF- diguanylate cyclase domain protein (611 aa)
              0.541
rpmA
L27- ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family (87 aa)
     
        0.531
WL94_14045
annotation not available (607 aa)
   
 
  0.514
WI67_05800
annotation not available (503 aa)
              0.493
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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