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WL94_25830 protein (Burkholderia cepacia) - STRING interaction network
"WL94_25830" - PBP_1a_fam: penicillin-binding , 1A family protein in Burkholderia cepacia
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
WL94_25830PBP_1a_fam- penicillin-binding , 1A family protein (709 aa)    
Predicted Functional Partners:
WL94_11605
annotation not available (849 aa)
   
 
0.866
WL94_31175
PBP_1a_fam- penicillin-binding , 1A family protein (840 aa)
   
 
0.848
WL94_25835
Uncharacterized protein (203 aa)
              0.847
WL94_15740
PBP_1a_fam- penicillin-binding , 1A family protein (795 aa)
   
 
0.845
WI67_15435
annotation not available (436 aa)
       
  0.840
WL94_32680
annotation not available (739 aa)
   
   
 
0.839
WL94_37010
annotation not available (942 aa)
         
  0.809
mrdA
Peptidoglycan D,D-transpeptidase MrdA; Catalyzes cross-linking of the peptidoglycan cell wall; Belongs to the transpeptidase family. MrdA subfamily (756 aa)
 
 
  0.807
mrdB
Peptidoglycan glycosyltransferase MrdB; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily (382 aa)
 
 
  0.756
WL94_12315
Peptidoglycan D,D-transpeptidase FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily (631 aa)
 
 
  0.727
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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