STRINGSTRING
DM42_5391 protein (Burkholderia cepacia) - STRING interaction network
"DM42_5391" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_5391annotation not available (412 aa)    
Predicted Functional Partners:
DM42_5388
annotation not available (383 aa)
 
        0.939
DM42_5389
annotation not available (348 aa)
 
          0.896
DM42_5390
annotation not available (426 aa)
 
          0.895
DM42_5393
annotation not available (310 aa)
 
          0.876
DM42_5392
annotation not available (440 aa)
     
      0.837
DM42_5386
annotation not available (313 aa)
 
        0.745
DM42_5387
annotation not available (459 aa)
     
      0.681
DM42_5384
annotation not available (232 aa)
 
        0.638
DM42_5385
annotation not available (315 aa)
 
          0.554
DM42_5383
annotation not available (236 aa)
 
          0.552
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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