STRINGSTRING
DM42_5397 protein (Burkholderia cepacia) - STRING interaction network
"DM42_5397" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_5397annotation not available (302 aa)    
Predicted Functional Partners:
WL94_18875
annotation not available (330 aa)
   
          0.642
DM42_5396
N-terminal domain of DJ-1_PfpI family protein (237 aa)
              0.616
DM42_5395
annotation not available (280 aa)
              0.582
WL94_08510
annotation not available (315 aa)
   
          0.564
WL94_32030
phn_lysR- aminoethylphosphonate catabolism associated LysR transcriptional regulator family protein (311 aa)
   
          0.563
DM42_6456
annotation not available (315 aa)
   
          0.481
DM42_6677
annotation not available (307 aa)
   
          0.456
WL94_26005
Amidohydrolases- amidohydrolase family protein (396 aa)
              0.443
DM42_5394
annotation not available (264 aa)
              0.438
WL94_33520
annotation not available (303 aa)
   
          0.419
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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