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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_02525Uncharacterized protein (109 aa)    
Predicted Functional Partners:
WL94_02530
annotation not available
       0.770
WL94_02535
annotation not available
       0.770
WI67_07215
Uncharacterized protein
  
     0.738
WI67_15295
gshA_ferroox: glutamate--cysteine ligase
 
     0.691
WI67_12645
Uncharacterized protein
  
     0.593
WL94_14180
Phasin: phasin family domain protein
  
     0.542
WL94_14760
FAD linked oxidase, C-terminal domain protein
  
   
 0.519
WL94_15710
annotation not available
  
     0.517
sdhD
Succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein
  
     0.512
cimH
annotation not available
       0.504
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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