STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phnUphnU: 2-aminoethylphosphonate ABC transporter, permease protein (306 aa)    
Predicted Functional Partners:
phnV
phnV: 2-aminoethylphosphonate ABC transport system, membrane component PhnV
  
 
0.990
phnS
phnS: 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein
 
  0.989
phnT
2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT; Belongs to the ABC transporter superfamily
 
  
  0.987
DM42_5482
annotation not available
       0.904
PhnA
hydr_PhnA: phosphonoacetate hydrolase
 
     0.867
PhnY
Putative phosphonoacetaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family
       0.845
cysA
Sulfate/thiosulfate transport system atp-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system
 
  
 0.832
cysW
Sulfate/thiosulfate transport system permease protein; permease_CysW: sulfate ABC transporter, permease protein CysW
  
0.801
CysC
Bifunctional enzyme cysn/cysc; Catalyzes the synthesis of activated sulfate
  
  
 0.694
sbp
annotation not available
 
  
 0.610
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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