STRINGSTRING
WI67_30460 protein (Burkholderia cepacia) - STRING interaction network
"WI67_30460" - AraC family transcriptional regulator in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WI67_30460AraC family transcriptional regulator; deoR C terminal sensor domain protein (252 aa)    
Predicted Functional Partners:
WI67_06015
annotation not available (341 aa)
   
 
 
  0.682
WL94_00885
annotation not available (341 aa)
   
 
 
  0.639
WL94_33780
annotation not available (363 aa)
   
 
 
  0.625
DM42_6818
annotation not available (337 aa)
   
 
 
  0.624
DM42_5506
annotation not available (65 aa)
              0.623
WI67_30465
annotation not available (61 aa)
              0.623
WI67_15865
annotation not available (339 aa)
   
 
 
  0.592
DM42_6032
annotation not available (340 aa)
   
 
 
  0.578
WL94_32760
annotation not available (596 aa)
              0.578
DM42_4323
annotation not available (346 aa)
   
 
 
  0.531
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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